Very nice job on the cockpit area! I think I still see some gaps, though. The pictures make it a bit difficult to tell.
I also like the tail section around the rotating thrusters. The middle section, like the cockpit, seems like it still has some gaps in it.
Also, if you care about things like physics (and in a fantasy space setting, it's OK not to care), those rotating thrusters are located too far aft to lift the ship properly. The tail would flip up and forward! Possible remedies: 1) Add a third thruster, right behind the cockpit. Have a look at these images of the Joint Strike Fighter, VTOL version
, to get a sense of what I mean. 2) Cut out that entire middle section, bring the two thrusters forward to just behind the cockpit, and add a pit of tail section so that the thrusters are at the center of gravity of your ship.